DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HOXA13

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_000513.2 Gene:HOXA13 / 3209 HGNCID:5102 Length:388 Species:Homo sapiens


Alignment Length:441 Identity:95/441 - (21%)
Similarity:144/441 - (32%) Gaps:133/441 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ASPAESEISVGGAPSPLPTQHHTHPHSHPHPLQHPRASTIDLLQQQQLLMQHHAAAAAAAAAAAS 74
            |:.|.:....||.             ..|||..........:           |||||||||||:
Human    44 AAAAAAAAGAGGG-------------GFPHPAAAAAGGNFSV-----------AAAAAAAAAAAA 84

  Fly    75 GLTRSAVGNLPEDYFHPLKRLRMSSSSSEPRDHTPSPPSAVPEPQTNQTTKSAIEGVKSFSIADI 139
            ...|:.:.: |.    ||.....|:.||.|.:   :||||...........:|.....|......
Human    85 NQCRNLMAH-PA----PLAPGAASAYSSAPGE---APPSAAAAAAAAAAAAAAAAAASSSGGPGP 141

  Fly   140 LGHSEKQREESVSP-PPNANLLAPPASRPIAPSGGLLQP--RTEPLDVHPAAAAAMLLPSGQIVR 201
            .|.:..:..:..|| ...|...:.||:.|....|....|  |..|   ||.|..:...|:.    
Human   142 AGPAGAEAAKQCSPCSAAAQSSSGPAALPYGYFGSGYYPCARMGP---HPNAIKSCAQPAS---- 199

  Fly   202 PWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQ--LLRHMG------------- 251
                            .:|...:..:. :|......|.|:::|:  ...|.|             
Human   200 ----------------AAAAAAFADKY-MDTAGPAAEEFSSRAKEFAFYHQGYAAGPYHHHQPMP 247

  Fly   252 --MNPAIIASEDGSSERSQR--------------SSSSNGSTECCSPRQAEKLEKLTTQEGSEEA 300
              ::..::....|..|....              .:..||...|                     
Human   248 GYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYC--------------------- 291

  Fly   301 QKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQI 365
              .|.:.||            ..|::.|..|.     .||.   |:....::.||.|..:|..|:
Human   292 --PKEQAQP------------PHLWKSTLPDV-----VSHP---SDASSYRRGRKKRVPYTKVQL 334

  Fly   366 FELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELK 416
            .|||:.:...|:::...|..|:|:..||..||..||||||.|:|:.|.:||
Human   335 KELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKKVINKLK 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 23/55 (42%)
HOXA13NP_000513.2 HoxA13_N 85..224 CDD:463521 33/170 (19%)
Homeodomain 323..379 CDD:459649 23/55 (42%)

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