DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HOXA6

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_076919.1 Gene:HOXA6 / 3203 HGNCID:5107 Length:233 Species:Homo sapiens


Alignment Length:239 Identity:62/239 - (25%)
Similarity:95/239 - (39%) Gaps:61/239 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 HLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQLLR--HMGMNPAIIASEDGSSERS 267
            :.:.||.|  ..:||.                |:.|..|..|.:  :..:.|  ..:..|:|...
Human     4 YFVNPTFP--GSLPSG----------------QDSFLGQLPLYQAGYDALRP--FPASYGASSLP 48

  Fly   268 QRSSSSNGSTECCSPRQAEKLEKLTTQEGSEE-------AQKKKSEEQPTGSGKSNGDTPLDALF 325
            .::.:|.     |..:|:..:  |.....|.|       :.|..|...|:||||..|  |.|.|.
Human    49 DKTYTSP-----CFYQQSNSV--LACNRASYEYGASCFYSDKDLSGASPSGSGKQRG--PGDYLH 104

  Fly   326 ----QMTTKDFDESQDKSHLDIFSNR-------PQPKKK------------RKSRTAFTNHQIFE 367
                |....|....|.|:..|..::|       |..::.            |:.|..:|.:|..|
Human   105 FSPEQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLE 169

  Fly   368 LEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRD 411
            |||.|.:.:||:...|.|||.:|.|:..|:..||||||.|.|::
Human   170 LEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 25/55 (45%)
HOXA6NP_076919.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..127 14/39 (36%)
Antp-type hexapeptide 136..141 1/4 (25%)
Homeodomain 156..212 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..233 62/239 (26%)

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