DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HOXA4

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_002132.3 Gene:HOXA4 / 3201 HGNCID:5105 Length:320 Species:Homo sapiens


Alignment Length:362 Identity:89/362 - (24%)
Similarity:124/362 - (34%) Gaps:133/362 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 PPNANLLAPPASRPIAPSGG--------LLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLG-- 208
            ||..:|   |..:|..|..|        ...|||.....:||||......:.....|:.:..|  
Human    48 PPTQHL---PLQQPQLPHAGGGREPTASYYAPRTAREPAYPAAALYPAHGAADTAYPYGYRGGAS 109

  Fly   209 PTMPVRPFIPSAL-------LHYEQRLALDYHRQLQEHFNAQAQL---LRHMGMNPAIIASEDGS 263
            |..|.:|..|.|.       ||....|              |.||   |:...:.||       :
Human   110 PGRPPQPEQPPAQAKGPAHGLHASHVL--------------QPQLPPPLQPRAVPPA-------A 153

  Fly   264 SERSQRSSS-----SNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDA 323
            ..|.:.:.:     :.||...|....|:|                    .|.|   ..|..|:  
Human   154 PRRCEAAPATPGVPAGGSAPACPLLLADK--------------------SPLG---LKGKEPV-- 193

  Fly   324 LFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAA 388
            ::....|....:.:.|:     |..:||   :||||:|..|:.||||.|.:.:||:...|.|||.
Human   194 VYPWMKKIHVSAVNPSY-----NGGEPK---RSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAH 250

  Fly   389 SLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVG 453
            :|.||..||..||||||.|.|:|                ||           |....|..|:   
Human   251 TLCLSERQVKIWFQNRRMKWKKD----------------HK-----------LPNTKMRSSN--- 285

  Fly   454 LAAAAAAAG-------------------MVVPVPGSV 471
              :|:|:||                   ...|||.|:
Human   286 --SASASAGPPGKAQTQSPHLHPHPHPSTSTPVPSSI 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 29/55 (53%)
HOXA4NP_002132.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..77 7/31 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..168 17/87 (20%)
Antp-type hexapeptide 194..199 0/4 (0%)
Homeodomain 216..272 CDD:459649 30/58 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 273..320 13/78 (17%)

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