DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbe and HOXA2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_006726.1 Gene:HOXA2 / 3199 HGNCID:5103 Length:376 Species:Homo sapiens


Alignment Length:339 Identity:77/339 - (22%)
Similarity:113/339 - (33%) Gaps:149/339 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 TPSPPSAVPEPQTNQTTKSAIEGVKSFSI-ADILGHSEKQREESVSPPPNANLLAP--PASRPIA 169
            |..||.|              :..:|.|| ...|.||      ::.|||....:..  |.|.|..
Human    23 TSFPPVA--------------DTFQSSSIKTSTLSHS------TLIPPPFEQTIPSLNPGSHPRH 67

  Fly   170 PSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHR 234
            .:||..:|       .||.:....:|:|.: :|         |..|::.      |::.|     
Human    68 GAGGRPKP-------SPAGSRGSPVPAGAL-QP---------PEYPWMK------EKKAA----- 104

  Fly   235 QLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEE 299
                         :...:.||..|:         .::::.|.. |.|                  
Human   105 -------------KKTALLPAAAAA---------ATAAATGPA-CLS------------------ 128

  Fly   300 AQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQ 364
              .|:|.|...|||..:                                     |:.|||:||.|
Human   129 --HKESLEIADGSGGGS-------------------------------------RRLRTAYTNTQ 154

  Fly   365 IFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKR------------------D 411
            :.||||.|.:.|||....|.||||.|.|:..||..||||||.|.||                  |
Human   155 LLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKCKSLED 219

  Fly   412 IEELKKDFDSVKVF 425
            .|::::|.:...:|
Human   220 SEKVEEDEEEKTLF 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 31/55 (56%)
HOXA2NP_006726.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..93 17/73 (23%)
Antp-type hexapeptide 94..99 1/4 (25%)
Homeodomain 144..200 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..229 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..279
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.