DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HOXA1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_005513.2 Gene:HOXA1 / 3198 HGNCID:5099 Length:335 Species:Homo sapiens


Alignment Length:455 Identity:101/455 - (22%)
Similarity:129/455 - (28%) Gaps:204/455 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PTQHHTHPHSHPHPLQHPRASTIDLLQQQQLLMQHHAAAAAAAAAAASGLTRSAVGNLPEDYFHP 91
            |..||.|.|.||.|                                   .|....|||...|.| 
Human    64 PHHHHHHHHRHPQP-----------------------------------ATYQTSGNLGVSYSH- 92

  Fly    92 LKRLRMSSSSSEP-----RDHTPSPPSAVPEPQTNQTTKSAIEGVKSFSIADILGHSEKQREESV 151
                    ||..|     ....|..|.|:     ||.             ||:            
Human    93 --------SSCGPSYGSQNFSAPYSPYAL-----NQE-------------ADV------------ 119

  Fly   152 SPPPNANLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPF 216
                               |||           :|..|.|:.  ||.:..|              
Human   120 -------------------SGG-----------YPQCAPAVY--SGNLSSP-------------- 138

  Fly   217 IPSALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCS 281
                              .:|.|.:.|......:| :|..|....|...:|...::.|.|   .|
Human   139 ------------------MVQHHHHHQGYAGGAVG-SPQYIHHSYGQEHQSLALATYNNS---LS 181

  Fly   282 PRQAEKLE--KLTTQEGSEEAQK---KKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHL 341
            |..|...|  :....|.|..||.   .|.:..|..:||                          :
Human   182 PLHASHQEACRSPASETSSPAQTFDWMKVKRNPPKTGK--------------------------V 220

  Fly   342 DIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRA 406
            ..:....||   ...||.||..|:.||||.|.:.|||:.|.|.||||||.|:..||..||||||.
Human   221 GEYGYLGQP---NAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRM 282

  Fly   407 KQ-KRDIEELKKDFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVGLAAAAAAAGMVVPVPGS 470
            || ||:.|.|                      |.|....|....:....::..:::...||.|||
Human   283 KQKKREKEGL----------------------LPISPATPPGNDEKAEESSEKSSSSPCVPSPGS 325

  Fly   471  470
            Human   326  325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 32/56 (57%)
HOXA1NP_005513.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 61..80 8/50 (16%)
Interaction with OGT. /evidence=ECO:0000250|UniProtKB:P09022 75..203 43/269 (16%)
COG5576 176..>286 CDD:227863 48/141 (34%)
Antp-type hexapeptide 204..209 0/4 (0%)
Homeodomain 233..286 CDD:459649 32/52 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..335 15/67 (22%)

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