DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HMX1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_061815.2 Gene:HMX1 / 3166 HGNCID:5017 Length:348 Species:Homo sapiens


Alignment Length:412 Identity:105/412 - (25%)
Similarity:142/412 - (34%) Gaps:128/412 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 MSSSSSEPRDHTPSPPSAVPEPQTNQTTKSAIEGVKSFSIADILG-------------HSEKQRE 148
            |....:||...||:..|                   ||.|.::|.             .|.:..|
Human     1 MPDELTEPGRATPARAS-------------------SFLIENLLAAEAKGAGRATQGDGSREDEE 46

  Fly   149 ESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPL-DVHPA--AAAAMLLPSGQIVRPWDHLLGPT 210
            |....|.:.:  |..|.|      ..||.|.:.| ...|.  |.|..||..|.:.      |||.
Human    47 EDDDDPEDED--AEQARR------RRLQRRRQLLAGTGPGGEARARALLGPGALG------LGPR 97

  Fly   211 MPVRPFIPSAL-----LHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRS 270
            .|..|..|.||     ..:..|                    .|.|....:  |.|.|...|..:
Human    98 PPPGPGPPFALGCGGAARWYPR--------------------AHGGYGGGL--SPDTSDRDSPET 140

  Fly   271 SSSNGSTECCSP---------RQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQ 326
            ....|..|...|         |:|.:|.......|:|||  .:..|.|..:|::.|...:..   
Human   141 GEEMGRAEGAWPRGPGPGAVQREAAELAARGPAAGTEEA--SELAEVPAAAGETRGGVGVGG--- 200

  Fly   327 MTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLG 391
                                    .:|:|:||.|:..|:|:||..|..::|||.|:|..:||||.
Human   201 ------------------------GRKKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQ 241

  Fly   392 LSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVGLAA 456
            |:..||..||||||.|.||   :|..:.::..:.......|..|..|       .|||..   ||
Human   242 LTETQVKIWFQNRRNKWKR---QLAAELEAASLSPPGAQRLVRVPVL-------YHESPP---AA 293

  Fly   457 AAAAAGMVVPVPGSVPMGGAPP 478
            |||.....:|.| ..|...|||
Human   294 AAAGPPATLPFP-LAPAAPAPP 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 28/55 (51%)
HMX1NP_061815.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..203 46/238 (19%)
Homeodomain 206..260 CDD:459649 27/53 (51%)
HMX family specific domain 1 263..273 0/9 (0%)
HMX family specific domain 2 276..289 4/19 (21%)

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