Protein Alignment lbe and vnd

DIOPT Version :10

• Sequence 1: NP_524435.2
• Gene: lbe / 42542
• FlyBaseID: FBgn0011278
• Length: 479
• Species: Drosophila melanogaster
• Sequence 2: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Alignment Length: 540
• Identity: 118/540 - (21%)
• Similarity: 164/540 - (30%)
• Gaps: 230/540 - (42%)

  Fly    22 APSPLPTQHHTH--PHSHPH---PLQHPRASTIDL-LQQQQ----------------LLMQHHAA 64
            ||...|.|.|.|  .|.|||   |.||.:.:...| |...|                ||..|:||
  Fly   289 APPSHPQQQHPHHQQHHHPHLLLPQQHHQQAVAPLPLAHHQSGEAQSHAHANAAAAHLLASHNAA 353

  Fly    65 AAAAAAAAASGLTRSAVGNLPEDY----------FHPLKR--LRMSSSSSEPRDH-------TPS 110
            ||||.||.      ..:.|||:::          :|.:.:  |:.|..|:..:::       ..|
  Fly   354 AAAAVAAG------QYLPNLPKNFPGSFGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQPAS 412

  Fly   111 PPSAVPEPQ--------TNQTTKSAIEGVKSFSIADILGHSEKQREESVSPPPNANLLAPPASRP 167
            |.|..|...        :|..|..|:.|       |...:|.....:::|        ...|...
  Fly   413 PDSTSPVTSEVSYTYIGSNCQTSPALSG-------DYKSYSRSADSDALS--------VGDALHT 462

  Fly   168 IAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDY 232
            :..|.|           :.:|..|          |..|.|
  Fly   463 LHGSSG-----------NGSAGGA----------PTAHAL------------------------- 481

  Fly   233 HRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGS 297
            |.......|.....|:..|:|.|....:|..:|                             :|.
  Fly   482 HNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNE-----------------------------DGI 517

  Fly   298 EEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTN 362
            ||......:...:|.|.:||...|                            |.||||.|..||.
  Fly   518 EEDIDDVDDADGSGGGDANGSDGL----------------------------PNKKRKRRVLFTK 554

  Fly   363 HQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEE------------- 414
            .|.:|||:||..|:|||..:|:.:|:.:.|:..||..||||.|.|.||...|
  Fly   555 AQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPGLLHGH 619

  Fly   415 --------------------------------LKKDFDSVKVFSAHKSFLENVNDLSILKKKPMH 447
                                            .|...|.|.|.||..:.::|.        ...|
  Fly   620 ATHPHHPSALPSPRRVAVPVLVRNGKPCLGDSSKLGADCVSVSSATATAMQNA--------AAHH 676

  Fly   448 ESDMVGLA----AAAAAAGM 463
            ...:.|.|    |||||||:
  Fly   677 LVALNGAAAYQHAAAAAAGL 696

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbe	NP_524435.2	Homeodomain	354..410	CDD:459649	26/55 (47%)
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	26/55 (47%)