DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and nkx2.7

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_571494.1 Gene:nkx2.7 / 30694 ZFINID:ZDB-GENE-990415-179 Length:269 Species:Danio rerio


Alignment Length:210 Identity:55/210 - (26%)
Similarity:89/210 - (42%) Gaps:44/210 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 PFIPSALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTEC 279
            ||....:|..||:.||                      ||.:....:..|...|     :...:|
Zfish    10 PFSVKDILKLEQQQAL----------------------NPGVFMGVEQDSVPLQ-----SLQLQC 47

  Fly   280 CSPRQAEKLEKLTTQEGSEEAQKKKSEE---------QPTGSGKSNGDTPLDALFQMTTKDF-DE 334
            .....:..|:.|.:.|.....::.|.::         .||       :..:||..:.:...| |.
Zfish    48 MQNTLSRSLDLLYSPEKGIPGEQVKCDDFDIVRSSCGSPT-------EEEMDANEETSMCPFTDS 105

  Fly   335 SQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVIT 399
            |....:.:....:|:.:.:||.|..|:..|:||||:||..|:|||..:||.:|.:|.|::.||..
Zfish   106 SYSSKNGETLREKPKQRLRRKPRVLFSQTQVFELERRFKQQRYLSAPERDHLALALKLTSTQVKI 170

  Fly   400 WFQNRRAKQKRDIEE 414
            ||||||.|.||..::
Zfish   171 WFQNRRYKCKRQRQD 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 29/55 (53%)
nkx2.7NP_571494.1 COG5576 87..210 CDD:227863 38/106 (36%)
Homeodomain 125..181 CDD:459649 29/55 (53%)

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