DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbe and dlx5a

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_571381.2 Gene:dlx5a / 30569 ZFINID:ZDB-GENE-990415-49 Length:282 Species:Danio rerio


Alignment Length:244 Identity:61/244 - (25%)
Similarity:98/244 - (40%) Gaps:69/244 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 PRTEPLDV-HPAAAAAMLLPSGQIVRPWDHLLGPTMPVRP------FIPSALLH--YEQRLALDY 232
            |..:|.|. :|...:.|..||.:         .||:|...      :.|:..:|  |....:..|
Zfish    10 PSIKPADFQNPFQLSTMHHPSQE---------SPTLPESTATDSGYYSPAGGVHHGYCSPNSGTY 65

  Fly   233 HRQLQEHFNAQAQLLRHMGMNPAIIASEDGSS-ERSQRSSSSNGSTECCSPRQAEKLEKLTTQEG 296
            .:.|      .|...::.|:|        ||| ..|.:|....||......:.|....::.:|..
Zfish    66 GKPL------NAYQYQYHGVN--------GSSGNYSAKSYPDYGSYSTAYHQYAGTYNRVQSQPS 116

  Fly   297 SEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFT 361
            .:|.:..:.|.:..     ||                               :|||.||.||.::
Zfish   117 PQEKETAEPEVRMV-----NG-------------------------------KPKKVRKPRTIYS 145

  Fly   362 NHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKR 410
            :.|:..|::||...:||:..:|.|:||||||:..||..||||:|:|.|:
Zfish   146 SFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKIWFQNKRSKLKK 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 26/55 (47%)
dlx5aNP_571381.2 DLL_N 31..117 CDD:463567 20/108 (19%)
Homeodomain 138..194 CDD:459649 26/55 (47%)

Return to query results.
Submit another query.