DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and emx3

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_571354.1 Gene:emx3 / 30536 ZFINID:ZDB-GENE-990415-53 Length:233 Species:Danio rerio


Alignment Length:98 Identity:35/98 - (35%)
Similarity:52/98 - (53%) Gaps:1/98 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 ESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVI 398
            :..|.|..::..:.|..:|.::.||||:..|:..||:.|....|:..|:|.::|..|.|:..||.
Zfish   116 QGDDSSPENLLLHGPFSRKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLANGLCLTETQVK 180

  Fly   399 TWFQNRRAKQKRD-IEELKKDFDSVKVFSAHKS 430
            .||||||.|.||. :||...|....:..|.|.|
Zfish   181 VWFQNRRTKHKRQKLEEESPDPQQKRKGSQHVS 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 23/55 (42%)
emx3NP_571354.1 Homeodomain 136..192 CDD:459649 23/55 (42%)

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