DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and hoxb8b

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_571256.1 Gene:hoxb8b / 30420 ZFINID:ZDB-GENE-980526-291 Length:247 Species:Danio rerio


Alignment Length:207 Identity:54/207 - (26%)
Similarity:79/207 - (38%) Gaps:31/207 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 PSALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSP 282
            ||.|..:....|..:..|..:.::.......|                      :|...|.|...
Zfish    37 PSVLYGHNTGSAFQHAAQFPDFYHHGTSSFPH----------------------ASYQQTPCAVA 79

  Fly   283 RQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFS-N 346
            ...:....:..|:|   .||:.....|.......||..|..   ...:|..||.:.....:|. .
Zfish    80 YPGDATGNILGQDG---LQKQSFFGAPDSDFTQFGDCNLKV---SGIRDDLESAEPCTAQLFPWM 138

  Fly   347 RPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRD 411
            |||...:|:.|..::.:|..||||.||:..||:...|.|::.:|.|:..||..||||||.|.|: 
Zfish   139 RPQATGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK- 202

  Fly   412 IEELKKDFDSVK 423
             |..|..|.|.|
Zfish   203 -EHNKDKFPSSK 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 24/55 (44%)
hoxb8bNP_571256.1 Antp-type hexapeptide 134..139 1/4 (25%)
Homeodomain 146..202 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..247 6/15 (40%)

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