DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbe and dbx2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_073798768.1 Gene:dbx2 / 30417 ZFINID:ZDB-GENE-000128-13 Length:199 Species:Danio rerio


Alignment Length:167 Identity:48/167 - (28%)
Similarity:71/167 - (42%) Gaps:36/167 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 KLEKLTTQEGSEEAQKKKSEEQP------------TGSGKSNGDTPLDALFQMTTKDFDESQDKS 339
            ::.:..|..|||..|..:....|            :|||      |:     |||.........|
Zfish    32 QIYRTNTGPGSENRQHTQRIHTPAVIMSTVNLPCCSGSG------PV-----MTTSPLFTKAVGS 85

  Fly   340 HL--DIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQ 402
            .|  ...::|.:|...|  |..|:..|..||||.|..|||:|..:|:.:|:.|.|...||..|||
Zfish    86 VLWTPAINSRSRPGILR--RAVFSEEQRRELEKTFSKQKYISKTERNRLASELSLKETQVKIWFQ 148

  Fly   403 NRRAKQKRDIEELKKDFDSVKVFSAHKSFLENVNDLS 439
            |||.|.:...|:        ::.:.| :.:|.:.|.|
Zfish   149 NRRMKWRNSREK--------EISNTH-THMEKLMDWS 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 26/55 (47%)
dbx2XP_073798768.1 None

Return to query results.
Submit another query.