DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and dbx1b

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_571253.1 Gene:dbx1b / 30416 ZFINID:ZDB-GENE-000128-11 Length:322 Species:Danio rerio


Alignment Length:329 Identity:78/329 - (23%)
Similarity:122/329 - (37%) Gaps:96/329 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 NLLAPPASRP--IAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSA 220
            :::||||..|  :.||..|..|        ||..:|....|..:|   :.||      |...|:|
Zfish     5 SVIAPPAMYPSFLRPSSALSLP--------PALQSAFTTHSSFLV---EDLL------RISRPAA 52

  Fly   221 LLHYEQRLALDYHRQLQE-----------HFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSN 274
            .:          ||.:..           ..|..:..: |:.|:.|:  ::..||.::..||..|
Zfish    53 FM----------HRSIPSPSASPPATGVTTLNTTSSAV-HVAMSTAL--AKRSSSPQTSISSDPN 104

  Fly   275 ----GSTECCSPRQAEKLEKLTTQEGSE----EAQKKKSEEQPTGSGK------------SNGDT 319
                |         ...:...||:..|.    :....|:...|...|.            |:...
Zfish   105 YLKFG---------VNAILASTTRNASPPPPVQGMNAKTFPFPCFDGSFHPFIRASYFPASSSAV 160

  Fly   320 PLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRD 384
            |:...|...               .:.|.:|::....|..|::.|...|||.|..|||:|..||.
Zfish   161 PIPGTFAWP---------------LTARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRK 210

  Fly   385 EIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFSAHKSFLE---NVN-DLSILKKKP 445
            ::|..|||.::||..||||||.|.:.     .|:.:.:......:..|.   |.| |||.:.|:.
Zfish   211 KLATKLGLKDSQVKIWFQNRRMKWRN-----SKERELLSSGGCREQTLPTKMNPNPDLSDVGKRF 270

  Fly   446 MHES 449
            .||:
Zfish   271 EHEA 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 26/55 (47%)
dbx1bNP_571253.1 COG5576 <173..296 CDD:227863 38/107 (36%)
Homeodomain 182..236 CDD:459649 26/53 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..266 7/27 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 296..322
Blue background indicates that the domain is not in the aligned region.

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