DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and dbx1a

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_571233.1 Gene:dbx1a / 30394 ZFINID:ZDB-GENE-000128-8 Length:314 Species:Danio rerio


Alignment Length:111 Identity:38/111 - (34%)
Similarity:56/111 - (50%) Gaps:15/111 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 RPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRD 411
            |.:|::....|..|::.|...|||.|..|||:|..||.::||.|||.::||..||||||.|.:..
Zfish   169 RGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWRNS 233

  Fly   412 IEELKKDFDSVKVFSA----HKSFLENVN---DLSILKKKPMHESD 450
            .|.        ::.|:    .::.....|   |||.:.||...:.|
Zfish   234 KER--------ELLSSGGCREQTLPTKTNPHPDLSDVGKKSSEDED 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 27/55 (49%)
dbx1aNP_571233.1 Homeodomain 178..232 CDD:459649 27/53 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..279 9/46 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 292..314
Blue background indicates that the domain is not in the aligned region.

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