DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and hoxb1b

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_571217.2 Gene:hoxb1b / 30374 ZFINID:ZDB-GENE-980526-290 Length:307 Species:Danio rerio


Alignment Length:205 Identity:59/205 - (28%)
Similarity:81/205 - (39%) Gaps:53/205 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 DY-HR----QLQEHFNAQAQ--LLRHMGMNPAIIASED---GSSERSQRSSSSNGSTECCSPRQA 285
            || |:    |..:|...|:.  .:.:||.|....:..:   ||...|...|.:.|..|   |...
Zfish    97 DYGHQHVLTQADDHMRLQSPGFSVVNMGANIGTYSESNCRPGSVSASHYQSYAYGEPE---PHGY 158

  Fly   286 EKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQP 350
            ....|......|:...|...::.||                     ||..:.|        |..|
Zfish   159 GSFSKYQVSPDSDSDSKTNIKQAPT---------------------FDWMKVK--------RNPP 194

  Fly   351 KKKRKS-----------RTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNR 404
            |..:.:           ||.||..|:.||||.|.:.|||:.|.|.|:||:|.|:..||..|||||
Zfish   195 KTVKVAEYGIHGQQNIIRTNFTTKQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNR 259

  Fly   405 RAKQKRDIEE 414
            |.|||:..:|
Zfish   260 RMKQKKREKE 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 30/66 (45%)
hoxb1bNP_571217.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..178 3/18 (17%)
Antp-type hexapeptide 183..188 3/25 (12%)
Homeodomain 212..265 CDD:459649 30/52 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..307 1/5 (20%)

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