DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and hoxb3a

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_571192.2 Gene:hoxb3a / 30339 ZFINID:ZDB-GENE-990415-104 Length:417 Species:Danio rerio


Alignment Length:163 Identity:48/163 - (29%)
Similarity:70/163 - (42%) Gaps:46/163 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 IASEDGSSERSQRSSS--SNGS-TECCSP-----RQAEKLEKLTTQEGSEEAQKKKSEEQPTGSG 313
            :|...|:|:.|.:|||  :|.: |:...|     ||..|.:..:....|..|:....|:.|.||.
Zfish   114 VAGSGGTSKSSSKSSSMATNPTLTKQIFPWMKESRQNTKQKNSSPSASSANAESSGGEKSPPGSA 178

  Fly   314 KSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYL 378
            .|                                      :::|||:|:.|:.||||.|.:.:||
Zfish   179 AS--------------------------------------KRARTAYTSAQLVELEKEFHFNRYL 205

  Fly   379 SPADRDEIAASLGLSNAQVITWFQNRRAKQKRD 411
            ....|.|:|..|.||..|:..||||||.|.|:|
Zfish   206 CRPRRVEMANLLNLSERQIKIWFQNRRMKYKKD 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 26/55 (47%)
hoxb3aNP_571192.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..135 8/20 (40%)
Antp-type hexapeptide 140..145 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..184 10/74 (14%)
Homeodomain 181..237 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..290 1/2 (50%)
DUF4074 353..415 CDD:463833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..417
Blue background indicates that the domain is not in the aligned region.

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