DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and hoxb2a

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_571191.1 Gene:hoxb2a / 30338 ZFINID:ZDB-GENE-990415-103 Length:390 Species:Danio rerio


Alignment Length:307 Identity:77/307 - (25%)
Similarity:112/307 - (36%) Gaps:80/307 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 DYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSS---------------------------ERSQ 268
            ::.|:: ...|:|..|...:...||::.|...||                           .|||
Zfish     4 EFEREI-GFINSQPSLAECLTSFPAVLESFQTSSIKDSTAIPPPFEHTIPSLSPCTGNQARPRSQ 67

  Fly   269 RSSSSNG---STECCSPRQAEKLEKLTTQEG----------------SEEAQKKKSEEQPTGSGK 314
            :.::|||   .|:...|.|        .|:|                .:|.:..|...:|..:..
Zfish    68 KRTASNGLQLRTQTAPPTQ--------HQQGPAPLSGGAPLAHEFPWMKEKKSSKKCPKPGATAA 124

  Fly   315 SNGDTPLDALFQMTTKDFDE-SQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYL 378
            :...:|..|....||...:. ::.:..||..|.      .|:.|||:||.|:.||||.|.:.|||
Zfish   125 AAAASPSQASSGYTTAGLESPTEIQGGLDNVSG------SRRLRTAYTNTQLLELEKEFHFNKYL 183

  Fly   379 SPADRDEIAASLGLSNAQVITWFQNRRAKQKRDI-------EELKKDFDSVKVFSAHKSFLENVN 436
            ....|.||||.|.|:..||..||||||.|.||..       |.....||.::...|...:.....
Zfish   184 CRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTTHHRDGQEGEPSGFDLLEGTDASSPYSSQSL 248

  Fly   437 DLSILKKKPMHESDMVGLAAAAAAAG-----------MVVPVPGSVP 472
            ::|........||:.....||...:.           ...|.|.|||
Zfish   249 EVSGSGSAAPSESETCPTTAAYTNSSDKSQPTPEEGQASQPEPASVP 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 31/55 (56%)
hoxb2aNP_571191.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..73 3/32 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..100 4/26 (15%)
Antp-type hexapeptide 103..108 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..155 9/46 (20%)
Homeodomain 159..215 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..338 17/85 (20%)
PRK11907 237..>320 CDD:237019 11/59 (19%)

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