DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Dlx3

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001099302.1 Gene:Dlx3 / 287638 RGDID:1304875 Length:287 Species:Rattus norvegicus


Alignment Length:114 Identity:42/114 - (36%)
Similarity:65/114 - (57%) Gaps:9/114 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 AQKKKSEEQPTGSGKSNG---DTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFT 361
            |...|||....||.:..|   :.||.|...::.|:..|:      ::.....:|||.||.||.::
  Rat    79 AYSPKSEYTYGGSYRQYGAYREQPLPAQDPVSVKEEPEA------EVRMVNGKPKKVRKPRTIYS 137

  Fly   362 NHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKR 410
            ::|:..|::||...:||:..:|.|:||.|||:..||..||||||:|.|:
  Rat   138 SYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKK 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 26/55 (47%)
Dlx3NP_001099302.1 DLL_N 27..107 CDD:463567 10/27 (37%)
COG5576 <109..230 CDD:227863 32/84 (38%)
Homeodomain 130..186 CDD:459649 26/55 (47%)

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