DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and VENTX

DIOPT Version :9

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_055283.1 Gene:VENTX / 27287 HGNCID:13639 Length:258 Species:Homo sapiens


Alignment Length:166 Identity:50/166 - (30%)
Similarity:71/166 - (42%) Gaps:33/166 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 SSERSQRSSSSNGSTE-----CCS-----PRQAE----KLEKLTTQEGSEEAQKKKSEEQPTGSG 313
            |..|..:..||.||.:     .||     ||.|:    .|.......|:.|..:..|.::..|| 
Human     6 SPPRGPQQLSSFGSVDWLSQSSCSGPTHTPRPADFSLGSLPGPGQTSGAREPPQAVSIKEAAGS- 69

  Fly   314 KSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYL 378
             ||...|...:..:                 |..|...:..:.|||||..|:..||..|.:.:||
Human    70 -SNLPAPERTMAGL-----------------SKEPNTLRAPRVRTAFTMEQVRTLEGVFQHHQYL 116

  Fly   379 SPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEE 414
            ||.:|..:|..:.||..|:.|||||||.|.||.:::
Human   117 SPLERKRLAREMQLSEVQIKTWFQNRRMKHKRQMQD 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeobox 356..410 CDD:395001 26/53 (49%)
VENTXNP_055283.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..93 22/105 (21%)
Homeobox 95..147 CDD:306543 26/51 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 227..248
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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