DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and tlx1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_739571.1 Gene:tlx1 / 266964 ZFINID:ZDB-GENE-021021-2 Length:301 Species:Danio rerio


Alignment Length:115 Identity:45/115 - (39%)
Similarity:67/115 - (58%) Gaps:5/115 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 FSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQ 408
            :.||..|||| |.||:||..||.||||||..||||:.|:|..:|.:|.:::|||.|||||||.|.
Zfish   168 YQNRTPPKKK-KPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKW 231

  Fly   409 KR----DIEELKKDFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVGL 454
            :|    :.|..::..:.:.:....::|.:.:|.........:|.|.:..|
Zfish   232 RRQTAEEREAERQQANRILMQLQQEAFQKTINQPVTPDPICLHNSSLFAL 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 32/55 (58%)
tlx1NP_739571.1 Homeodomain 177..233 CDD:459649 33/56 (59%)

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