DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbe and NKX2-8

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_055175.2 Gene:NKX2-8 / 26257 HGNCID:16364 Length:239 Species:Homo sapiens


Alignment Length:222 Identity:56/222 - (25%)
Similarity:81/222 - (36%) Gaps:81/222 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 CCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDI 343
            |.:...:|:....::.|.|.|.....|.::|:....|.|.   ||                    
Human    40 CAAWLDSERGHYPSSDESSLETSPPDSSQRPSARPASPGS---DA-------------------- 81

  Fly   344 FSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQ 408
                   :|::|.|..|:..|..|||:||..|:|||..:|:::|:.|.|:..||..||||.|.|.
Human    82 -------EKRKKRRVLFSKAQTLELERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKL 139

  Fly   409 KRDIEELKKDFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVGLAAAAAAAGM----VVPV-- 467
            ||           .:...|.:|                  .|:...|...||.|:    ||||  
Human   140 KR-----------ARAPGAAES------------------PDLAASAELHAAPGLLRRVVVPVLV 175

  Fly   468 --------PGSVPMG--------GAPP 478
                    .|...:|        ||||
Human   176 RDGQPCGGGGGGEVGTAAAQEKCGAPP 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 25/55 (45%)
NKX2-8NP_055175.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..87 12/76 (16%)
Homeodomain 85..141 CDD:459649 25/55 (45%)

Return to query results.
Submit another query.