DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Vax2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_036042.1 Gene:Vax2 / 24113 MGIID:1346018 Length:292 Species:Mus musculus


Alignment Length:224 Identity:63/224 - (28%)
Similarity:98/224 - (43%) Gaps:32/224 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 DGSSER----SQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDT-- 319
            ||.:||    .:|......|......|.||.| :..|...|.......|...|.||.:|.||:  
Mouse     3 DGGAERDRGPKRREEPGGRSGRHGEHRGAEDL-RADTGSASPREIAGTSASSPAGSRESGGDSDG 66

  Fly   320 -----PLDALFQMTTKD----FDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQ 375
                 ..|...::..:|    ..|......||:  :||     :::||:||..|::.||..|...
Mouse    67 QQALGETDHCRRILVRDAKGTIREIVLPKGLDL--DRP-----KRTRTSFTAEQLYRLEMEFQRC 124

  Fly   376 KYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFSAHKSFLENVNDLSI 440
            :|:...:|.|:|..|.||..||..||||||.|||:|   ..:|.:.....||.::|..: |.|.:
Mouse   125 QYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD---QSRDLEKRASSSASEAFATS-NVLRL 185

  Fly   441 LKKKPMHESDMVGLAAAAAAAGMVVPVPG 469
            |:     :..::.:..|.:...:...:||
Mouse   186 LE-----QGRLLSVPRAPSLLALTPGLPG 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 25/55 (45%)
Vax2NP_036042.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..74 19/71 (27%)
Homeodomain 103..159 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..242 2/3 (67%)

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