DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Vax1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_033527.1 Gene:Vax1 / 22326 MGIID:1277163 Length:338 Species:Mus musculus


Alignment Length:295 Identity:72/295 - (24%)
Similarity:107/295 - (36%) Gaps:103/295 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 RLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKL 291
            |::.:.|::.:|...|:..|       ||....|      .|.:.|.:|::|.|:          
Mouse    20 RVSKNAHKESREIKGAEGSL-------PAAFLKE------PQGAFSGSGASEDCN---------- 61

  Fly   292 TTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDK----SHLDIFSNRPQPKK 352
                                ..|||.....|...::..:|...|..:    ..||:  :||    
Mouse    62 --------------------KSKSNSSADPDYCRRILVRDAKGSIREIILPKGLDL--DRP---- 100

  Fly   353 KRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKK 417
             :::||:||..|::.||..|...:|:...:|.|:|..|.||..||..||||||.|||:|   ..|
Mouse   101 -KRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD---QGK 161

  Fly   418 DFDSVKVFSAHKSFLENVNDLSILK---------------KKPMHESDMVG-------------- 453
            |.:...|.|      |.....|:|:               ..|...:..:|              
Mouse   162 DSELRSVVS------ETAATCSVLRLLEQGRLLSPPGLPALLPPCATGALGSALRGPSLPALGAG 220

  Fly   454 -----LAAAAAAAGMVVPVPGSV------PMGGAP 477
                 .|||||||....|.|...      .:||||
Mouse   221 AAAGSAAAAAAAAAATAPGPAGAASQHQPAVGGAP 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 25/55 (45%)
Vax1NP_033527.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 16/91 (18%)
Homeodomain 101..157 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..269 5/17 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..338
Blue background indicates that the domain is not in the aligned region.

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