DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and ceh-31

DIOPT Version :9

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_508525.3 Gene:ceh-31 / 191621 WormBaseID:WBGene00000452 Length:260 Species:Caenorhabditis elegans


Alignment Length:226 Identity:59/226 - (26%)
Similarity:100/226 - (44%) Gaps:45/226 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 DGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALF 325
            |.:::.:.:|||........|..:...|...|:.        ..:|..|:.:..::.::|...  
 Worm    17 DPTNQLAAQSSSGGAKINLNSSFRISDLLDPTSH--------STNEPDPSPTSINSSESPSSP-- 71

  Fly   326 QMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASL 390
            ::.:.:.:.|.::|...:.|     ||.||:||.||:.|:.|||..|..|||||..||.|:|..:
 Worm    72 RIGSPNTERSVNESPTCVGS-----KKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRM 131

  Fly   391 GLSNAQVITWFQNRRAKQKRDIE---ELKKDFDSVKVFSAHKSFL-----------ENVNDLSIL 441
            ||::.||.||:||||.|.||...   :|..|..::   :|.:..|           :|.:.....
 Worm   132 GLTDTQVKTWYQNRRTKWKRQASVGMDLLHDAGNM---AAVQQLLRTNPYWANYLSQNTSMFGAS 193

  Fly   442 KKKPMHESDMVGLAAAAAAAGMVVPVPGSVP 472
            ..:|:..|             :|||....:|
 Worm   194 NNRPVFNS-------------LVVPTSSMIP 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeobox 356..410 CDD:395001 29/53 (55%)
ceh-31NP_508525.3 Homeobox 98..150 CDD:278475 29/51 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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