DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Nkx2-6

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_035050.2 Gene:Nkx2-6 / 18092 MGIID:97351 Length:289 Species:Mus musculus


Alignment Length:284 Identity:64/284 - (22%)
Similarity:99/284 - (34%) Gaps:99/284 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 RHMGMNPAIIASEDGSSERSQRSSS-----------SNGSTECCSPRQAEKLEKLTTQEGSEEAQ 301
            |::.||     .|.|..|.|.|:.:           ..||.....|:         |..|:....
Mouse    42 RYLRMN-----QESGWFESSDRAQAVPFRCTWETVLEMGSNPVGEPQ---------TPPGTISRL 92

  Fly   302 KKKSEEQPTGSGKSNGDT----PLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTN 362
            ..::.....|.|..:||.    |:                       |.|.:|  :||||..|:.
Mouse    93 GARNPMTDRGVGNLSGDMRRGGPV-----------------------STRTRP--QRKSRVLFSQ 132

  Fly   363 HQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFSA 427
            .|:..||:||..|:||:..:|:.:|::|.|::.||..||||||.|.|...:      |.....:.
Mouse   133 AQVLALERRFKQQRYLTAPEREHLASALQLTSTQVKIWFQNRRYKSKSQRQ------DQTLELAG 191

  Fly   428 HKSFLENVN-DLSILKKKPMHESDMVGL-----------------------------AAAAAAAG 462
            |......|. .:.:|..||..:.|:...                             .:|:|..|
Mouse   192 HPLAPRRVAVPVLVLDGKPCLDPDVAAFLGPYKATSPYSCFGGYAGTPYDASYASRCTSASAGPG 256

  Fly   463 MVVPV------PG---SVPMGGAP 477
            .:.|:      ||   :.|.|..|
Mouse   257 PLTPLASSGFSPGGQSAAPQGHLP 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 26/55 (47%)
Nkx2-6NP_035050.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..125 13/83 (16%)
Homeodomain 124..179 CDD:459649 26/54 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..289 6/22 (27%)

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