DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Nkx2-5

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_032726.1 Gene:Nkx2-5 / 18091 MGIID:97350 Length:318 Species:Mus musculus


Alignment Length:320 Identity:77/320 - (24%)
Similarity:116/320 - (36%) Gaps:138/320 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 PSPPSAVPEPQTNQTTKSAIEGVKSFSIADILGHSEKQRE----------ESVSPPPNANLLA-- 161
            || |:..|.|               ||:.|||...::||.          |:...|.:..|.|  
Mouse     3 PS-PALTPTP---------------FSVKDILNLEQQQRSLASGDLSARLEATLAPASCMLAAFK 51

  Fly   162 PPA-SRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRP-FIPSALLHY 224
            |.| |.|.|.:.||.:.|.|   :.||              |......|..|..| |.|.|    
Mouse    52 PEAYSGPEAAASGLAELRAE---MGPA--------------PSPPKCSPAFPAAPTFYPGA---- 95

  Fly   225 EQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLE 289
                                    :...:||    :|..:::.          |.|:.::|.:|:
Mouse    96 ------------------------YGDPDPA----KDPRADKK----------ELCALQKAVELD 122

  Fly   290 KLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKR 354
            |..| :|:|                                                ||:.:::|
Mouse   123 KAET-DGAE------------------------------------------------RPRARRRR 138

  Fly   355 KSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEE 414
            |.|..|:..|::|||:||..|:|||..:||::|:.|.|::.||..||||||.|.||..::
Mouse   139 KPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQD 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 28/55 (51%)
Nkx2-5NP_032726.1 Homeodomain 144..194 CDD:459649 25/49 (51%)

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