DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Nkx2-2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_035049.1 Gene:Nkx2-2 / 18088 MGIID:97347 Length:273 Species:Mus musculus


Alignment Length:247 Identity:63/247 - (25%)
Similarity:88/247 - (35%) Gaps:81/247 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 EDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDAL 324
            ||||........|                      ||.|.|::    ..|.|.|      .|||:
Mouse    24 EDGSVAEGPEEES----------------------EGPEPAKR----AGPLGQG------ALDAV 56

  Fly   325 FQMTTKD-FDESQDKSHL-----------------------DIFSNRPQPK-------------- 351
            ..:..|. |.:|.|..:.                       |..|..|:|.              
Mouse    57 QSLPLKSPFYDSSDNPYTRWLASTEGLQYSLHGLAASAPPQDSSSKSPEPSADESPDNDKETQGG 121

  Fly   352 -----KKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRD 411
                 ||||.|..|:..|.:|||:||..|:|||..:|:.:|:.:.|:..||..||||.|.|.|| 
Mouse   122 GGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKR- 185

  Fly   412 IEELKKDFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVGLAAAAAAAGM 463
             ...:|..:...:.|..:..:    .:.:...||.|......||||...||:
Mouse   186 -ARAEKGMEVTPLPSPRRVAV----PVLVRDGKPCHALKAQDLAAATFQAGI 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 25/55 (45%)
Nkx2-2NP_035049.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56 14/63 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..131 7/39 (18%)
Homeodomain 129..185 CDD:459649 25/55 (45%)

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