DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and mls-2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_508815.2 Gene:mls-2 / 180751 WormBaseID:WBGene00003377 Length:341 Species:Caenorhabditis elegans


Alignment Length:413 Identity:88/413 - (21%)
Similarity:153/413 - (37%) Gaps:145/413 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 SAVGNLPEDYFHPLKRLRMSSSSSEPRDHTPS--PPSAVPEPQTNQTTKSAIEGVKSFSIADILG 141
            ::|.|||.|         |::.||:.|....|  |...:.|.:..:..|.:.:....|:|:::| 
 Worm     3 TSVMNLPID---------MTTMSSQERLEKMSQLPKIELMEEEEEEEMKPSSDNKIKFNISELL- 57

  Fly   142 HSEKQREESVSPPPNA--------------NLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAM 192
              |..|:.:....|:|              |....|...||:   .|||.:...|:|        
 Worm    58 --EDDRKPTTQSSPSASSEDSTNEIEQTAFNFNFDPKMNPIS---ALLQLQQTFLNV-------- 109

  Fly   193 LLPSGQIVRPWDHLLGPTMPVRPF--IPSA-LLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNP 254
               ..|     .:::.| :.:.||  :|:| |:|::..                        .||
 Worm   110 ---GNQ-----QNMISP-LTMFPFFGLPTAQLMHFKNM------------------------SNP 141

  Fly   255 AIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDT 319
            .:....|...|:.::|...:|.|.                                   .|.|.:
 Worm   142 DVNIQSDNGEEKDEKSEGKDGETR-----------------------------------DSTGGS 171

  Fly   320 PLDALFQMTTKDFDE----SQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSP 380
            ||::    ..:|.|:    |.|:::    |:.|...:|:|:||.|:..|:.:||..|..::|||.
 Worm   172 PLES----DAEDDDDIGRGSDDEAN----SSDPSQNRKKKTRTVFSRSQVSQLEMMFECKRYLSS 228

  Fly   381 ADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFSAHKSFLENVNDLSILKKKP 445
            .:|..:|..|.|:..||..||||||.|.||..:                     .:|.:|  ...
 Worm   229 QERSNLAQKLHLTETQVKIWFQNRRNKFKRQAQ---------------------TDDTNI--SLQ 270

  Fly   446 MHESDMVGLAAAAAAAGMVVPVP 468
            ||.:::..:.|..|....::.:|
 Worm   271 MHRANVFSIPATTALTSPILTIP 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 24/55 (44%)
mls-2NP_508815.2 Homeodomain 202..258 CDD:459649 24/55 (44%)

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