DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and ceh-19

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001023142.1 Gene:ceh-19 / 177590 WormBaseID:WBGene00000442 Length:199 Species:Caenorhabditis elegans


Alignment Length:193 Identity:54/193 - (27%)
Similarity:81/193 - (41%) Gaps:46/193 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 FNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKK 304
            ||.::.|.:.  .||.    |:|:....:..|..||                  :|..||     
 Worm     3 FNIESLLEKK--SNPV----EEGNDFEEENDSEKNG------------------EEDEEE----- 38

  Fly   305 SEEQPTGSGKSNGDTPLDALF----QMTTKDFDESQDKSHLDIFSNRPQPKKKRKS------RTA 359
             ||:....|.:|..|...|:|    .:.|....|.|  ..|.:.:.:...|:.|||      |.|
 Worm    39 -EEKNVIDGWTNMATSQLAMFAIANDLRTPTLVELQ--MLLGVSARKHDYKRSRKSVCERKPRQA 100

  Fly   360 FTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKR----DIEELKKD 418
            ::..|:..||..|...||||...|.:::.:|.|:..|:.|||||||.|.|:    .|.::.||
 Worm   101 YSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQNRRTKWKKQLTSSIRQMVKD 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 25/61 (41%)
ceh-19NP_001023142.1 Homeodomain 95..151 CDD:459649 22/55 (40%)

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