DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Msx2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_038629.2 Gene:Msx2 / 17702 MGIID:97169 Length:267 Species:Mus musculus


Alignment Length:266 Identity:72/266 - (27%)
Similarity:107/266 - (40%) Gaps:75/266 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 PAIIASE---DGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEA---QKKKSEEQPT-- 310
            ||::|..   .|.:|         ||.|       |:..|:::...|.||   .||..:|.|.  
Mouse    18 PAVLAGPGPGPGGAE---------GSAE-------ERRVKVSSLPFSVEALMSDKKPPKESPAVP 66

  Fly   311 ------------------GSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQP------- 350
                              |...::...||...|:..:...:.|:|.:.......|..|       
Mouse    67 PDCASAGAVLRPLLLPGHGVRDAHSPGPLVKPFETASVKSENSEDGAPWIQEPGRYSPPPRHMSP 131

  Fly   351 --------KKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAK 407
                    |..||.||.||..|:..||::|..::|||.|:|.|.::||.|:..||..||||||||
Mouse   132 TTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAK 196

  Fly   408 QKR----DIEELKKDFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVGLAAAAAAAGMVVPVP 468
            .||    ::|:||         .|.|..|.:...|......|:..:.:.|  |:......|:|:|
Mouse   197 AKRLQEAELEKLK---------MAAKPMLPSGFSLPFPINSPLQAASIYG--ASYPFHRPVLPIP 250

  Fly   469 GSVPMG 474
               |:|
Mouse   251 ---PVG 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 29/55 (53%)
Msx2NP_038629.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 9/39 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..132 4/27 (15%)
Homeodomain 143..199 CDD:459649 29/55 (53%)

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