Protein Alignment lbe and lin-39

DIOPT Version :10

• Sequence 1: NP_524435.2
• Gene: lbe / 42542
• FlyBaseID: FBgn0011278
• Length: 479
• Species: Drosophila melanogaster
• Sequence 2: NP_001021164.1
• Gene: lin-39 / 176068
• WormBaseID: WBGene00003024
• Length: 253
• Species: Caenorhabditis elegans
• Alignment Length: 188
• Identity: 52/188 - (27%)
• Similarity: 79/188 - (42%)
• Gaps: 41/188 - (21%)

  Fly   242 AQAQLLRHMG--MNPAIIASEDGSSERSQRSSSSNG-----------STECCSPRQAEKLEKLTT 293
            |.|.|..|.|  .:|.      .||:.:...:||.|           .:.|.:|...........
 Worm    59 ASAALSAHFGSYYDPT------SSSQIASYFASSQGLGGPQYPILGDQSLCYNPSVTSTHHDWKH 117

  Fly   294 QEGSEEAQKKKSEEQPTGSGKSNGDTPLD-----ALFQMTTKDFDESQDKSHLDIFSNRPQPKKK 353
            .||.::..|...::     |.|..|..:|     |::...|:            :.|.....:.:
 Worm   118 LEGDDDDDKDDDKK-----GISGDDDDMDKNSGGAVYPWMTR------------VHSTTGGSRGE 165

  Fly   354 RKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRD 411
            ::.|||:|.:|:.||||.|...|||:...|.|:|.||.|:..||..||||||.|.|::
 Worm   166 KRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKE 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbe	NP_524435.2	Homeodomain	354..410	CDD:459649	28/55 (51%)
lin-39	NP_001021164.1	Homeodomain	166..222	CDD:459649	28/55 (51%)