DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and GSX2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_573574.2 Gene:GSX2 / 170825 HGNCID:24959 Length:304 Species:Homo sapiens


Alignment Length:67 Identity:32/67 - (47%)
Similarity:40/67 - (59%) Gaps:0/67 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   345 SNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQK 409
            |:..|....::.|||||:.|:.|||:.|....|||...|.|||..|.||..||..||||||.|.|
Human   194 SDASQVPNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHK 258

  Fly   410 RD 411
            ::
Human   259 KE 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 29/55 (53%)
GSX2NP_573574.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..151
Homeodomain 203..259 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..304
Blue background indicates that the domain is not in the aligned region.

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