DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Hoxb9

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_032296.2 Gene:Hoxb9 / 15417 MGIID:96190 Length:250 Species:Mus musculus


Alignment Length:312 Identity:85/312 - (27%)
Similarity:114/312 - (36%) Gaps:83/312 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 AIEG-VKSFSIADILGHSEKQREESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAA 190
            :|.| :.|:.:..|:.|..:.              ||||.   .|||....||      .|..|.
Mouse     2 SISGTLSSYYVDSIISHESED--------------APPAK---FPSGQYANPR------QPGHAE 43

  Fly   191 AMLLPSGQIVRPWDHLLGPTMPV-----RPFIPSALLHYEQRLALDYHRQLQEHF--NAQAQLLR 248
            .:..||..        ..|..||     .|..|    |....|...||..||...  .|:::.||
Mouse    44 HLDFPSCS--------FQPKAPVFGASWAPLSP----HASGSLPSVYHPYLQPQGAPAAESRYLR 96

  Fly   249 HMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSG 313
             ..:.||            .|:.::.|..:.     |.|.|.|....|....|........|.:|
Mouse    97 -TWLEPA------------PRAEAAPGQGQA-----AVKAEPLLGAPGELLKQGTPEYSLETSAG 143

  Fly   314 K----SN-----GDTPLDALFQMTTKDFDESQDKSHLD---IFSNRPQPKKKRKSRTAFTNHQIF 366
            :    ||     ||          .|..:.|:||...|   ..:|....:..||.|..:|.:|..
Mouse   144 REAVLSNQRAGYGD----------NKICEGSEDKERPDQTNPSANWLHARSSRKKRCPYTKYQTL 198

  Fly   367 ELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKD 418
            ||||.||:..||:...|.|:|..|.||..||..||||||.|.|:..:|..|:
Mouse   199 ELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQGKE 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 28/55 (51%)
Hoxb9NP_032296.2 Hox9_act 1..172 CDD:461369 52/232 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..48 11/49 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..182 5/21 (24%)
Homeodomain 186..242 CDD:459649 28/55 (51%)

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