DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Hoxb5

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_032294.2 Gene:Hoxb5 / 15413 MGIID:96186 Length:269 Species:Mus musculus


Alignment Length:181 Identity:58/181 - (32%)
Similarity:85/181 - (46%) Gaps:22/181 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 GMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKS 315
            |..|    |....|:::..:|||...||......:.:.|:..:|..|....:.:.|...|.:...
Mouse   109 GAKP----SASSPSDQATPASSSANFTEIDEASASSEPEEAASQLSSPSLARAQPEPMATSTAAP 169

  Fly   316 NGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSP 380
            .|.||  .:|....|          |.|..:...|..|| :|||:|.:|..||||.|.:.:||:.
Mouse   170 EGQTP--QIFPWMRK----------LHISHDMTGPDGKR-ARTAYTRYQTLELEKEFHFNRYLTR 221

  Fly   381 ADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFSAHKSF 431
            ..|.|||.:|.||..|:..||||||.|.|:| .:||    |:.:.:|..:|
Mouse   222 RRRIEIAHALCLSERQIKIWFQNRRMKWKKD-NKLK----SMSLATAGSAF 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 28/55 (51%)
Hoxb5NP_032294.2 PRK07003 <67..>171 CDD:235906 14/65 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..173 15/67 (22%)
Antp-type hexapeptide 176..181 1/4 (25%)
Homeodomain 195..251 CDD:459649 29/56 (52%)

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