DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Nkx6-2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_899071.2 Gene:Nkx6-2 / 14912 MGIID:1352738 Length:277 Species:Mus musculus


Alignment Length:79 Identity:36/79 - (45%)
Similarity:49/79 - (62%) Gaps:6/79 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 KKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAK-QKRDIEEL 415
            ||:.||..|:..|||.|||.|...|||:..:|..:|.|||::.:||..||||||.| :||...|:
Mouse   147 KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 211

  Fly   416 -----KKDFDSVKV 424
                 |:|.|:.|:
Mouse   212 ASAKKKQDSDAEKL 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 27/56 (48%)
Nkx6-2NP_899071.2 Homeodomain 147..205 CDD:459649 29/57 (51%)

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