DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Gsx2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_573555.1 Gene:Gsx2 / 14843 MGIID:95843 Length:305 Species:Mus musculus


Alignment Length:330 Identity:75/330 - (22%)
Similarity:104/330 - (31%) Gaps:109/330 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 SEPRDHTPSP----PSAVPEPQTNQTTKSAIEGVKS--FSIAD--ILGHSEKQREESVSPPPNAN 158
            |.|..| |.|    |..:|.|.....:.......||  |.:..  :..|....|     ||..|.
Mouse    21 SLPESH-PGPDFFIPLGMPSPLVMSVSGPGCPSRKSGAFCVCPLCVTSHLHSSR-----PPAGAG 79

  Fly   159 LLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSALLH 223
            ..|...:......||          |.....|..||.|.....|.|....|.:.          |
Mouse    80 GGATGTAGAAVAGGG----------VAGGTGALPLLKSQFSPAPGDAQFCPRVS----------H 124

  Fly   224 YEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTE-----CCS-- 281
                 |..:|...|.|.:      .|....|...|:...::..:..::::.|..:     |.:  
Mouse   125 -----AHHHHHPPQHHHH------HHQPQQPGSAAAAAAAAAAAAAAAAALGHPQHHAPVCAATT 178

  Fly   282 -----PRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHL 341
                 ||:...|    :..||:.:|      .|.|                              
Mouse   179 YNMSDPRRFHCL----SMGGSDTSQ------VPNG------------------------------ 203

  Fly   342 DIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRA 406
                        ::.|||||:.|:.|||:.|....|||...|.|||..|.||..||..||||||.
Mouse   204 ------------KRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRV 256

  Fly   407 KQKRD 411
            |.|::
Mouse   257 KHKKE 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 29/55 (53%)
Gsx2NP_573555.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..151 10/56 (18%)
Homeodomain 204..260 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..305 1/3 (33%)

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