DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Gsx1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_032204.1 Gene:Gsx1 / 14842 MGIID:95842 Length:261 Species:Mus musculus


Alignment Length:119 Identity:40/119 - (33%)
Similarity:58/119 - (48%) Gaps:4/119 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 GSEEAQKKKSEEQPTGSGKSNGD---TPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSR 357
            ||:........:.....|.::|.   ....||:| |:....:.:....:.:.|:..|....::.|
Mouse    87 GSQYCHAPLGRQHSVSPGVAHGPAAAAAAAALYQ-TSYPLPDPRQFHCISVDSSSNQLPSSKRMR 150

  Fly   358 TAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRD 411
            ||||:.|:.|||:.|....|||...|.|||..|.||..||..||||||.|.|::
Mouse   151 TAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 29/55 (53%)
Gsx1NP_032204.1 SNAG domain. /evidence=ECO:0000250 1..20
Homeodomain 147..203 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..261 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.

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