DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and NKX2-5

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_004378.1 Gene:NKX2-5 / 1482 HGNCID:2488 Length:324 Species:Homo sapiens


Alignment Length:310 Identity:76/310 - (24%)
Similarity:115/310 - (37%) Gaps:117/310 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 PSPPSAVPEPQTNQTTKSAIEGVKSFSIADILGHSEKQREESVSPPPNANLLAPPASRPIAPSGG 173
            || |:..|.|               ||:.|||...::||..:.:...:|.|.|     .:|||..
Human     3 PS-PALTPTP---------------FSVKDILNLEQQQRSLAAAGELSARLEA-----TLAPSSC 46

  Fly   174 LLQPRTEPLDVHPAAAAAMLLPS--GQIVR-PWDHLLGPTMPVRP-FIPSALLHYEQRLALDYHR 234
            :|..........|.|||.. ||.  .::.| |.........|..| |.|.|              
Human    47 MLAAFKPEAYAGPEAAAPG-LPELRAELGRAPSPAKCASAFPAAPAFYPRA-------------- 96

  Fly   235 QLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEE 299
                          :...:||    :|..:|:.          |.|:.::|.:||| |..:.:| 
Human    97 --------------YSDPDPA----KDPRAEKK----------ELCALQKAVELEK-TEADNAE- 131

  Fly   300 AQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQ 364
                                                           ||:.:::||.|..|:..|
Human   132 -----------------------------------------------RPRARRRRKPRVLFSQAQ 149

  Fly   365 IFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEE 414
            ::|||:||..|:|||..:||::|:.|.|::.||..||||||.|.||..::
Human   150 VYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQD 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 28/55 (51%)
NKX2-5NP_004378.1 Homeodomain 145..195 CDD:459649 25/49 (51%)

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