DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Gbx2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_034392.1 Gene:Gbx2 / 14472 MGIID:95668 Length:348 Species:Mus musculus


Alignment Length:395 Identity:100/395 - (25%)
Similarity:138/395 - (34%) Gaps:124/395 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 PPS--AVPEPQTNQTTKSAIEGVKSFSIADILGHSEKQREESVSPP-PNAN-------------- 158
            |||  .:..|..:.|         :|||..::|          ||| |:..              
Mouse     6 PPSLMMMQRPLGSST---------AFSIDSLIG----------SPPQPSPGHFVYTGYPMFMPYR 51

  Fly   159 --LLAPPASRPIAPSGGLLQPRTEPLDVH------PAAAAAML-------------LPSGQIVRP 202
              :|.||...|.|.....|||...|...|      |....:.|             ||.|....|
Mouse    52 PVVLPPPPPPPPALPQAALQPALPPAHPHHQIPSLPTGFCSSLAQGMALTSTLMATLPGGFSASP 116

  Fly   203 WDHLLGPTMPVRPFIPSALL---HYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSS 264
            ...   .....|.|.|..|.   ::::..||            ||.             :|||.:
Mouse   117 QHQ---EAAAARKFAPQPLPGGGNFDKAEAL------------QAD-------------AEDGKA 153

  Fly   265 ERSQRSSSSNGSTECCSPRQA--EKLEKLTTQEGSEEAQKKKSEEQPTGSGKS---NGDTPLDAL 324
                 ..:..||....|..:|  ..|......:|.:|:   |.|:.|.|..:|   ..|....:.
Mouse   154 -----FLAKEGSLLAFSAAEAVQASLVGAVRGQGKDES---KVEDDPKGKEESFSLESDVDYSSD 210

  Fly   325 FQMTTKDFDESQDKSHLDIFSNRPQ----------PKKKRKSRTAFTNHQIFELEKRFLYQKYLS 379
            ..:..:...:.:|..|  .....||          ..|.|:.|||||:.|:.||||.|..:||||
Mouse   211 DNLPGQTAHKEEDPGH--ALEETPQSGGAAGSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLS 273

  Fly   380 PADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFSAHKSFLENVNDLSILKKK 444
            ..:|.:||.:|.||..||..||||||||.||           ||..:|:....|...:..|:...
Mouse   274 LTERSQIAHALKLSEVQVKIWFQNRRAKWKR-----------VKAGNANSKTGEPSRNPKIVVPI 327

  Fly   445 PMHES 449
            |:|.|
Mouse   328 PVHVS 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 32/55 (58%)
Gbx2NP_034392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81 6/21 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 6/30 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 14/76 (18%)
Homeodomain 248..304 CDD:459649 32/55 (58%)

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