DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Emx1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_034261.2 Gene:Emx1 / 13796 MGIID:95387 Length:290 Species:Mus musculus


Alignment Length:313 Identity:84/313 - (26%)
Similarity:113/313 - (36%) Gaps:84/313 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 GHSEKQREESVSPPPN-----ANLLAPPASRP------IAPSGGL-LQPRTEPLDVHPAAAAAML 193
            ||....|    :|.|:     |.:..|.|.|.      :|..||. ..|.:.....||.|.||  
Mouse    15 GHRAFPR----APLPHSASAAATMFQPAAKRGFTIESLVAKDGGTGGSPGSGGAGSHPLAVAA-- 73

  Fly   194 LPSGQIVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIA 258
                           ...|:||            .||:|     .|.:| |:.....|. ||..|
Mouse    74 ---------------SEEPLRP------------TALNY-----PHPSA-AETAFVSGF-PAAAA 104

  Fly   259 SEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTT----QEGSEEAQKKKSEEQPTGSGKSNGDT 319
            :..|        .|..|..|...| :|.....||.    |.||...|      .|.....:....
Mouse   105 AGAG--------RSLYGGPELVFP-EAMNHPALTVHPAHQLGSSSLQ------PPHSFFSAQHRD 154

  Fly   320 PL--------DALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQK 376
            ||        :..|....:..|..||    .:..:.|..:|.::.||||:..|:..||:.|....
Mouse   155 PLHFYPWVLRNRFFGHRFQASDVPQD----GLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNH 215

  Fly   377 YLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRD-IEELKKDFDSVKVFSAH 428
            |:..|:|.::|.||.||..||..||||||.|.||. :||...:.:..|..|.|
Mouse   216 YVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQKKKGSHH 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 25/55 (45%)
Emx1NP_034261.2 Homeodomain 193..249 CDD:459649 25/55 (45%)

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