DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Dbx1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001005232.1 Gene:Dbx1 / 13172 MGIID:94867 Length:335 Species:Mus musculus


Alignment Length:350 Identity:86/350 - (24%)
Similarity:126/350 - (36%) Gaps:71/350 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 LLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSALLH 223
            ||||||..|     .||:| |..|.:..:..:|....|..:|.....:..|...:...||:|.|.
Mouse     6 LLAPPAGYP-----SLLRP-TPTLTLPQSLQSAFSGHSSFLVEDLIRISRPPTYLSRSIPAASLS 64

  Fly   224 YEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQA-EK 287
            ...:.|                        ||.:|....|...|..|.|..||    ||:.| ..
Mouse    65 PPSQEA------------------------PAALADSGTSDLGSPGSGSRRGS----SPQTALSP 101

  Fly   288 LEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSN------ 346
            ..:.|..:....|....:..:.|.........|....|......|......|:....|:      
Mouse   102 ASEPTFLKFGVNAILSSAPRRETSPALLQSPPPKTFAFPYFEGSFQPFIRSSYFPASSSVVPIPG 166

  Fly   347 --------RPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQN 403
                    |.:|::....|..|::.|...|||.|..|||:|..||.::|:.|||.::||..||||
Mouse   167 TFSWPLAARGKPRRGMLRRAVFSDVQRKALEKTFQKQKYISKPDRKKLASKLGLKDSQVKIWFQN 231

  Fly   404 RRAKQKRDIEELKKDFDSVKVFSA----HKSFLENVN---DLSILKKKPM--HESDMVGLAAAAA 459
            ||.|.:...|.        ::.|:    .::....:|   |||.:.:|..  .|.|..|...|..
Mouse   232 RRMKWRNSKER--------ELLSSGGCREQTLPTKLNPHPDLSDVGQKGPGDEEEDNPGARLAYH 288

  Fly   460 AAG-----MVVPVPGSVPMGGAPPK 479
            |..     :..|:|.|.....:|.|
Mouse   289 APADPRHLLEGPLPASPAHSSSPGK 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 26/55 (47%)
Dbx1NP_001005232.1 PRK12323 <49..182 CDD:481241 28/160 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..102 17/71 (24%)
Homeodomain 184..238 CDD:459649 26/53 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..335 16/81 (20%)

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