DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Barhl1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_476450.1 Gene:Barhl1 / 117232 RGDID:620648 Length:327 Species:Rattus norvegicus


Alignment Length:320 Identity:88/320 - (27%)
Similarity:131/320 - (40%) Gaps:93/320 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 LLRHMGMNPAIIASE----DGSS--ERSQRSSSSNGSTECCSPRQAEK--LEKLTTQEGSEEAQK 302
            :|.|...:||:...:    |..|  |.|.||.|   |::|.||....:  ||..|::.|:.....
  Rat    12 ILSHRAGSPALPKGDPLLGDCRSPLELSPRSES---SSDCSSPASPGRDCLETSTSRPGAASGPG 73

  Fly   303 KKSEEQP----------------------------------TGSGKSNGDTPLDALFQMTTKDFD 333
            ..|..||                                  :.||:.....|...|.....:||.
  Rat    74 LDSHLQPGQLSAPAQSRTVTSSFLIRDILADCKPLAACAPYSSSGQPAAPEPGGRLAAKAGEDFR 138

  Fly   334 ESQDKS----------------HLDIFSNRPQP----KKKRKSRTAFTNHQIFELEKRFLYQKYL 378
            :..|||                ..:|.|:|..|    ||.||:|||||:||:.:||:.|..||||
  Rat   139 DKLDKSVSSASSDSEYKVKEEGDREISSSRDSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYL 203

  Fly   379 SPADRDEIAASLGLSNAQVITWFQNRRAKQKR-------------DIEELKKDFDSVKVFSAHKS 430
            |..||.|:||||.|::.||.||:||||.|.||             :...|::.|.|...:.  :|
  Rat   204 SVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYP--QS 266

  Fly   431 FLENVNDLSIL------------KKKPMHESDMV-GLAAAAAAAGMVVPVPGSVPMGGAP 477
            .:.|::..:.|            .::|:....:: ||..|:.....:.|:||.:|....|
  Rat   267 LVSNLDPGAALYLYRGPSAPPPALQRPLVPRILIHGLQGASEPPPPLPPLPGVLPRAAQP 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 34/55 (62%)
Barhl1NP_476450.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90 22/80 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..181 16/67 (24%)
Homeodomain 179..235 CDD:459649 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..327 7/24 (29%)

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