DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and barhl2

DIOPT Version :9

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_012817899.1 Gene:barhl2 / 100493839 XenbaseID:XB-GENE-482777 Length:359 Species:Xenopus tropicalis


Alignment Length:483 Identity:113/483 - (23%)
Similarity:154/483 - (31%) Gaps:241/483 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PASPAESEI-SVGGAP-SPL-----PTQHHTHPHSHPHPLQHPRASTIDLLQQQQLLMQHHAAAA 66
            |.|| :||| :||.:| ||:     |...|....|..|..||               :||     
 Frog    40 PLSP-DSEIDTVGSSPSSPISVTMEPVDQHRLVDSVHHSAQH---------------LQH----- 83

  Fly    67 AAAAAAASGLTRSAVGNLPEDYFHPLKRLRMSSSSSEPRDHTPSPPSAVPEPQTNQTTKSAIEGV 131
                                  .||       :....|:...|....:.|...|:          
 Frog    84 ----------------------LHP-------TQQQSPQQQQPPQLGSAPRTSTS---------- 109

  Fly   132 KSFSIADILGHSEKQREESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPS 196
             ||.|.||||.|:                                         |.||.|     
 Frog   110 -SFLIKDILGDSK-----------------------------------------PLAACA----- 127

  Fly   197 GQIVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASED 261
                           |....:||           .:|..            :|.|          
 Frog   128 ---------------PYSTTVPS-----------PHHTP------------KHEG---------- 144

  Fly   262 GSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPT---GSG-KSNGDTPLD 322
                        |||:|...|:..:::     |:|..:|:|.: |:..|   |.| |..||.   
 Frog   145 ------------NGSSESFRPKLEQEM-----QDGKGKAEKIR-EDLHTDIKGHGTKEEGDR--- 188

  Fly   323 ALFQMTTKDFDESQDKSHLDIFSNRPQP----KKKRKSRTAFTNHQIFELEKRFLYQKYLSPADR 383
                               :|.|:|..|    ||.||:||||::||:.:||:.|..|||||..||
 Frog   189 -------------------EITSSRESPPVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDR 234

  Fly   384 DEIAASLGLSNAQVITWFQNRRAKQKR-------------DIEELKKDFDSVKVFSAHKSFLENV 435
            .::||:|.|::.||.||:||||.|.||             :...|::.|.|...:  |.|.|   
 Frog   235 MDLAAALNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFY--HPSLL--- 294

  Fly   436 NDLSILKKKPMHESDMVGLAAAAAAAGM 463
                         |.|....||||||.|
 Frog   295 -------------SSMDSTTAAAAAAAM 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeobox 356..410 CDD:395001 29/53 (55%)
barhl2XP_012817899.1 Homeobox 208..261 CDD:365835 29/52 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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