Protein Alignment lbe and hoxc12

DIOPT Version :10

• Sequence 1: NP_524435.2
• Gene: lbe / 42542
• FlyBaseID: FBgn0011278
• Length: 479
• Species: Drosophila melanogaster
• Sequence 2: XP_002936693.1
• Gene: hoxc12 / 100487557
• XenbaseID: XB-GENE-853677
• Length: 263
• Species: Xenopus tropicalis
• Alignment Length: 271
• Identity: 66/271 - (24%)
• Similarity: 94/271 - (34%)
• Gaps: 64/271 - (23%)

  Fly   158 NLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSA-- 220
            |...|....|..||  |..||.|.:...|.|:..   |.....:|:   |...:.:.|....|
 Frog    28 NFRTPGGQLPGLPS--LSYPRRENVCSLPWASTE---PCNGYPQPY---LSSPVSINPSFSRACD 84

  Fly   221 LLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNP---------AIIASEDGSSERSQRSSSSNGS 276
            |...|:...  |:|:               |.||         .::..|.|.......:......
 Frog    85 LARVEETKC--YYRE---------------GCNPDTPSLKRENVLLPLESGIHSAMNSTFQKYDY 132

  Fly   277 TECCS-PRQAEKLEKLTTQEGS---EEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQD 337
            |...| |......:.|.:..||   .|..|....|..|.:..||....|.|
 Frog   133 TAVDSVPHDPPSCQSLESDSGSSLLNEGTKNAVSEAATMASPSNPGNSLPA-------------- 183

  Fly   338 KSHLDIFSNRP-QP--KKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVIT 399
                   |..| .|  .:.||.|..::..|:.|||..|:..::::...|.|::..|.||:.||..
 Frog   184 -------SGAPWYPIHTRSRKKRKPYSKIQLAELEGEFMVNEFITRQRRRELSDRLSLSDQQVKI 241

  Fly   400 WFQNRRAKQKR 410
            ||||||.|:||
 Frog   242 WFQNRRMKKKR 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbe	NP_524435.2	Homeodomain	354..410	CDD:459649	22/55 (40%)
hoxc12	XP_002936693.1	Homeodomain	196..252	CDD:459649	22/55 (40%)