Protein Alignment lbe and Hoxb2

DIOPT Version :10

• Sequence 1: NP_524435.2
• Gene: lbe / 42542
• FlyBaseID: FBgn0011278
• Length: 479
• Species: Drosophila melanogaster
• Sequence 2: NP_001386664.1
• Gene: Hoxb2 / 100361765
• RGDID: 2319509
• Length: 355
• Species: Rattus norvegicus
• Alignment Length: 387
• Identity: 80/387 - (20%)
• Similarity: 112/387 - (28%)
• Gaps: 155/387 - (40%)

  Fly   101 SSEPRDHTPSPPSAVPEPQTNQTTKSAIEGVKSFSIADILGHSEKQREESVSPPPNANLLAPPAS 165
            :|..::.|..||   |.|...||..|.           .||.|..||..|..|..:...|.||..
  Rat    34 TSSIKESTLIPP---PPPPLEQTFPSL-----------QLGASTLQRPGSQKPAGDGPALRPPPP 84

  Fly   166 RPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSALLHYEQRLAL 230
            .|:||                        |:.:.  ||
  Rat    85 LPVAP------------------------PAPEF--PW--------------------------- 96

  Fly   231 DYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQE 295
                                                                             
  Rat    97 ----------------------------------------------------------------- 96

  Fly   296 GSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQP--KKKRKSRT 358
                .::|||.::|:.|..    ||..|...:.........|...|      |:.  ...|:.||
  Rat    97 ----MKEKKSAKKPSQSAA----TPSPAASSVRASGVGSPSDGPGL------PESGGSGSRRLRT 147

  Fly   359 AFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVK 423
            |:||.|:.||||.|.:.|||....|.||||.|.|:..||..||||||.|.||..:..:.......
  Rat   148 AYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQHREPPDGEPG 212

  Fly   424 VFSAHKSFLENVNDLSI----LKKKPMHESDMVGLAAAAAAAGMVVPVPGSVPM---GGAPP 478
            ..||.....|...:.::    :....:.|:..:...||....|...|:|.:..:   |.:.|
  Rat   213 GLSAQDDAGEPAEEPTVSPGDVASHRLREACFLPAEAAQGPRGAPPPLPPATALESVGASSP 274

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbe	NP_524435.2	Homeodomain	354..410	CDD:459649	31/55 (56%)
Hoxb2	NP_001386664.1	Homeodomain	143..199	CDD:459649	31/55 (56%)