DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and nkx2-1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_002935383.1 Gene:nkx2-1 / 100135015 XenbaseID:XB-GENE-485985 Length:346 Species:Xenopus tropicalis


Alignment Length:66 Identity:29/66 - (43%)
Similarity:42/66 - (63%) Gaps:0/66 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 QPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIE 413
            |...:||.|..|:..|::|||:||..|||||..:|:.:|:.:.|:..||..||||.|.|.||..:
 Frog   158 QATPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAK 222

  Fly   414 E 414
            :
 Frog   223 D 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 26/55 (47%)
nkx2-1XP_002935383.1 Homeodomain 163..219 CDD:459649 26/55 (47%)

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