DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbl and BARX2

DIOPT Version :9

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_003649.2 Gene:BARX2 / 8538 HGNCID:956 Length:279 Species:Homo sapiens


Alignment Length:279 Identity:71/279 - (25%)
Similarity:100/279 - (35%) Gaps:101/279 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LRSPISLEHDRQKSSPVRVKSFSIADILGRGHEEDRVEKKPERIAIPNALPGVPAPLALINERLQ 98
            |.||..|:..|:     |.|:|.|.:||.: ...|..||                          
Human     9 LSSPGQLKAARR-----RYKTFMIDEILSK-ETCDYFEK-------------------------- 41

  Fly    99 IPLVPNCPP----PAALHTFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLNPAIIASE 159
            :.|...||.    |..||:......|.:|                    .||..:|..|.:|:..
Human    42 LSLYSVCPSLVVRPKPLHSCTGSPSLRAY--------------------PLLSVITRQPTVISHL 86

  Fly   160 DGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQ 224
            ..::....::.|.:..||..|                       .|.|.|.:.:|.::       
Human    87 VPATPGIAQALSCHQVTEAVS-----------------------AEAPGGEALASSES------- 121

  Fly   225 LSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLG 289
                   |.:.|.        ...||.|:|||.||..|:..|||:|..|||||..||.::|..||
Human   122 -------ETEQPT--------PRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLG 171

  Fly   290 LSNAQVITWFQNRRAKLKR 308
            |:..||.||:||||.|.|:
Human   172 LTQLQVKTWYQNRRMKWKK 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 39/103 (38%)
Homeobox 254..307 CDD:278475 30/52 (58%)
BARX2NP_003649.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..137 8/48 (17%)
Homeobox 136..189 CDD:306543 30/52 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..279
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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