DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and NKX6-2

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_796374.2 Gene:NKX6-2 / 84504 HGNCID:19321 Length:277 Species:Homo sapiens


Alignment Length:135 Identity:44/135 - (32%)
Similarity:66/135 - (48%) Gaps:30/135 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 KKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKR----DM 310
            ||:.||..|:.||||.|||.|...|||:..:|..:|..||::.:||..||||||.|.::    :|
Human   147 KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAVEM 211

  Fly   311 EELKKDVQCEKIPDQSADPNRSHHNHPHYHQQHQHYAHMQSIGSDRDMDKDRCREKEKDKDKEEL 375
            ...||        .|.:|..:                 ::..|||.:.|.:..|..:.:.|.|::
Human   212 ASAKK--------KQDSDAEK-----------------LKVGGSDAEDDDEYNRPLDPNSDDEKI 251

  Fly   376 -RMLK 379
             |:||
Human   252 TRLLK 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 34/85 (40%)
Homeodomain 252..308 CDD:459649 27/55 (49%)
NKX6-2NP_796374.2 Repressor domain. /evidence=ECO:0000250|UniProtKB:D3Z4R4 89..142
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..155 4/7 (57%)
Homeodomain 147..205 CDD:459649 29/57 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..250 11/64 (17%)
Blue background indicates that the domain is not in the aligned region.

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