DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and ATHB13

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_177136.1 Gene:ATHB13 / 843314 AraportID:AT1G69780 Length:294 Species:Arabidopsis thaliana


Alignment Length:228 Identity:57/228 - (25%)
Similarity:95/228 - (41%) Gaps:39/228 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 SQEDRMEVPKKSPEEQP-----------KGASKSSGD-TPLDALFQLST-KNFDEEQDPATLNIF 242
            |.||  :.|.:||...|           .|.:...|. :|::....|.| .|.:.|:|   .:..
plant    19 SYED--DHPHQSPSLAPLLPSCSLPQDLHGFASFLGKRSPMEGCCDLETGNNMNGEED---YSDD 78

  Fly   243 ATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLK 307
            .::...||:|     ...:|:..|||.|.....|.|..:.::|..|||...|:..|||||||:.|
plant    79 GSQMGEKKRR-----LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 138

  Fly   308 RDMEELKKDVQCEKIPDQSADPNRSHHNHPHYHQQH--------QHYAHMQSIGSDRDMDKDRCR 364
              .::|:||....|   :..|..::.::....|.|.        ::....:||..:::.: ..|.
plant   139 --TKQLEKDYDTLK---RQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTESINLNKETE-GSCS 197

  Fly   365 EKEKDKDKEELRMLKLMTLMRYSDGKLLYQQPP 397
            .: .|...:.|| |.:.|....:|..|....||
plant   198 NR-SDNSSDNLR-LDISTAPPSNDSTLTGGHPP 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 37/138 (27%)
Homeodomain 252..308 CDD:459649 20/55 (36%)
ATHB13NP_177136.1 Homeodomain 85..138 CDD:459649 22/57 (39%)
HALZ 140..181 CDD:460477 7/43 (16%)

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