DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and AtHB23

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_564268.1 Gene:AtHB23 / 839587 AraportID:AT1G26960 Length:255 Species:Arabidopsis thaliana


Alignment Length:139 Identity:36/139 - (25%)
Similarity:54/139 - (38%) Gaps:42/139 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 FQLSTKNFDEEQDPATLNIF------------------------------ATRSNPKKKRKSRTA 257
            |.|...:.:||..|..|..|                              .::...||:|     
plant    15 FSLQNHHQEEEDHPQLLQDFHGFLGKRSPMNNVQGFCNLDMNGDEEYSDDGSKMGEKKRR----- 74

  Fly   258 FTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAK-----LKRDMEELKKDV 317
            ...:|:..|||.|.....|....:.|:|..|||...|:..|||||||:     |::|.:.||:  
plant    75 LNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKR-- 137

  Fly   318 QCEKIPDQS 326
            |.|.:.|::
plant   138 QFESLRDEN 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 36/139 (26%)
Homeodomain 252..308 CDD:459649 21/60 (35%)
AtHB23NP_564268.1 HOX 71..124 CDD:197696 22/57 (39%)
HALZ 126..167 CDD:460477 7/23 (30%)

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